I’m considering changing servers and factions and curious to what I might risk losing by doing so? How will my horde garrison look, will i have everything that is currently in my alliance one ready and waiting for me in my horde one, specifically my auction house?
This article goes over what to expect with a faction change-- nothing changes when just transferring realms.
Regarding your garrison, I’m fairly certain you’re going to be starting from scratch.
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“Followers, Shipyard, and completed Garrison buildings will be kept. Unfinished missions, buildings, or work orders will be lost” phew glad i wont be, thanks for the article…would still like to know if im gonna lose my AH or not…
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What do you mean by “Lose my AH”? If you mean the server’s AH, than it’ll be fine.
I mean the AH quest we completed with our Trading Post during WoD so we could have one in our garrison…have a feeling if a trading post is replaced I may lose that auctioneer that I spent too much gold on to put together 
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As far as I know, the Garrison and whatever was unlocked in it, should swap over. That said, I don’t have any specific information on the Auction House through your Trading Post. It looks like there is a Horde and Alliance version of that quest, if I were a betting person, I’d say that it should swap.
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And in the event that it doesn’t im assuming I’d just be SoL and have to do the quest all over again and spend a hefty price of gold buying the parts needed or waste even more time in Ashran pvping to get the parts?
Yes, in the event it doesn’t transfer over, you’d need to complete the quest again. Warlords of Draenor tended to swap over with faction changes as most quests had a direct counterpart. The later expansions, like Battle for Azeroth, have more unique lines so most of that does not transfer.
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Thank you kind <Sir or Ma’am> for your response. Much appreciated. 
The current recipe doesn’t have any PvP parts, last I looked. Unless they put them back? Because during the period that Ashran wasn’t happening, they removed those drops from the quest.
That is correct. They removed that requirement when they temporarily disabled Ashran. I’ve done it recently and it still does not require the PvP parts.
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I have transferred my Main back and forth and he has always kept his AH in the garrison regardless of faction.
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