Ok, so, I transfigged an item first to see if I could transfig a second time, and hit item quality. I then masterworked (landed on weapon dmg), then all of the numbers changed from yellow to normal color, then tempered, and transfigged again (hitting cooldown reduc).
It seems when I masterworked weapon dmg, it broke the item quality calculations? The item quality at the top still says 51, so it is applying the quality levels, just not calculating and displaying the numbers correctly.
I tried to provide an imgur link to show the item, but I guess I can’t.