Alliance Internal Conflict

The Alliance outposts weren’t removed, they were seeded to the Zandalari. It is presumed, but not directly mentioned, that the Horde did the same with most of their bases on Kul’Tiras.

I say most because Plunder Harbor is the home base of Fogsail Freebooters pirates who allied with the Horde during the war and I don’t see them giving up their home.